close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG41842.1Ethanolamine permease. (493 aa)    
Predicted Functional Partners:
AKG41843.1
TolC family type I secretion outer membrane protein.
  
  
 0.847
AKG41841.1
GntR family transcriptional regulator.
 
   
 0.798
AKG41840.1
Glutamine synthetase catalytic region.
 
  
 0.780
AKG41838.1
Short chain dehydrogenase.
 
   
 0.744
AKG41839.1
Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
  
 0.734
AKG42040.1
Alpha amylase, catalytic domain protein.
   
 0.653
AKG42523.1
Alpha-amylase.
   
 0.653
AKG42525.1
Alpha-glucosidase.
   
 0.653
AKG42551.1
Alpha-amylase.
   
 0.653
AKG45639.1
Trehalose synthase.
   
 0.653
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.