STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG42812.1Trehalose 6-phosphate phosphorylase. (833 aa)    
Predicted Functional Partners:
AKG42813.1
Beta-phosphoglucomutase hydrolase.
  
 0.997
AKG42814.1
DNA-binding protein.
      0.579
AKG46050.1
Alpha amylase.
 
  
 0.547
AKG45639.1
Trehalose synthase.
 
  
 0.544
AKG44551.1
Alpha,alpha-trehalose-phosphate synthase.
     
 0.511
AKG46803.1
Stress-inducible protein.
  
    0.501
AKG46053.1
Malto-oligosyltrehalose synthase.
 
   
 0.478
AKG42833.1
Hypothetical protein.
 
 
 0.473
glgE
Alpha-amylase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
  
 0.463
AKG42151.1
Glycosyl hydrolase.
  
   
 0.458
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
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