STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG43116.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
iolG
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).
 
 
  0.997
AKG43120.1
Acetolactate synthase; Belongs to the TPP enzyme family.
 
 
 0.997
AKG43119.1
IolB protein.
 
  
 0.967
AKG43117.1
Carbohydrate kinase.
 
  
 0.959
AKG43118.1
Deoxyribose-phosphate aldolase superfamily protein.
 
    0.940
AKG43114.1
Transcriptional regulator.
 
  
 0.925
AKG46110.1
Sugar ABC transporter substrate-binding protein.
 
    0.879
AKG46111.1
Ribose ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.
 
    0.869
AKG46112.1
Sugar ABC transporter ATP-binding protein.
 
    0.860
AKG43121.1
Methylmalonate-semialdehyde dehydrogenase.
 
    0.703
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
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