STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG43224.1cyclohexanecarboxyl-CoA dehydrogenase. (396 aa)    
Predicted Functional Partners:
AKG46558.1
Electron transfer flavoprotein, alpha subunit.
 
 0.935
AKG46557.1
Electron transfer flavoprotein alpha/beta-subunit.
 
 
 0.895
AKG46034.1
Fatty acid oxidation complex alpha-subunit.
 
 0.893
AKG44918.1
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.817
AKG45651.1
enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.813
AKG45553.1
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.752
AKG41819.1
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein.
 
 0.735
AKG45110.1
2-ketocyclohexanecarboxyl-CoA hydrolase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.647
AKG42207.1
Enoyl- hydratase isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.636
AKG43223.1
UDP-glucose 6-dehydrogenase.
  
    0.615
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
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