STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG43835.1Carbonic anhydrase. (751 aa)    
Predicted Functional Partners:
AKG42417.1
Carbonic anhydrase.
  
 
 0.930
AKG42462.1
ubiquinol-Cytochrome c reductase cytochrome b subunit.
    
 
 0.925
AKG41581.1
Mycocerosate synthase, 6-deoxyerythronolide-B synthase.
  
 
 0.923
AKG41455.1
Protein tyrosine/serine phosphatase.
   
   0.918
AKG41474.1
Ankyrin.
    
 
 0.918
AKG44456.1
Ankyrin-like protein.
    
 
 0.918
AKG43544.1
NADH dehydrogenase chain M.
  
 
 0.911
AKG43569.1
nuoM protein.
  
 
 0.911
AKG44005.1
Calcineurin-like phosphoesterase.
  
   0.883
sbcD
Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.
  
   0.883
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
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