Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKG41802.1 | AKG44235.1 | SXIM_04180 | SXIM_28510 | Pyridoxamine 5-phosphate oxidase, FMN-binding. | Hypothetical protein. | 0.555 |
AKG41802.1 | argG | SXIM_04180 | SXIM_53510 | Pyridoxamine 5-phosphate oxidase, FMN-binding. | Argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 2 subfamily. | 0.555 |
AKG41802.1 | argH | SXIM_04180 | SXIM_04160 | Pyridoxamine 5-phosphate oxidase, FMN-binding. | Argininosuccinate lyase. | 0.783 |
AKG44233.1 | AKG44234.1 | SXIM_28490 | SXIM_28500 | Integral membrane protein. | Iron-sulfur-binding reductase. | 0.815 |
AKG44233.1 | AKG44235.1 | SXIM_28490 | SXIM_28510 | Integral membrane protein. | Hypothetical protein. | 0.451 |
AKG44233.1 | dcd | SXIM_28490 | SXIM_28480 | Integral membrane protein. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.833 |
AKG44233.1 | dnaK | SXIM_28490 | SXIM_28540 | Integral membrane protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.525 |
AKG44233.1 | grpE | SXIM_28490 | SXIM_28550 | Integral membrane protein. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.557 |
AKG44234.1 | AKG44233.1 | SXIM_28500 | SXIM_28490 | Iron-sulfur-binding reductase. | Integral membrane protein. | 0.815 |
AKG44234.1 | AKG44235.1 | SXIM_28500 | SXIM_28510 | Iron-sulfur-binding reductase. | Hypothetical protein. | 0.547 |
AKG44234.1 | AKG44236.1 | SXIM_28500 | SXIM_28520 | Iron-sulfur-binding reductase. | Oxidoreductase. | 0.428 |
AKG44234.1 | AKG44237.1 | SXIM_28500 | SXIM_28530 | Iron-sulfur-binding reductase. | Secreted protein. | 0.425 |
AKG44234.1 | dcd | SXIM_28500 | SXIM_28480 | Iron-sulfur-binding reductase. | Deoxycytidine triphosphate deaminase; Bifunctional enzyme that catalyzes both the deamination of dCTP to dUTP and the hydrolysis of dUTP to dUMP without releasing the toxic dUTP intermediate. | 0.659 |
AKG44234.1 | dnaK | SXIM_28500 | SXIM_28540 | Iron-sulfur-binding reductase. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.679 |
AKG44234.1 | grpE | SXIM_28500 | SXIM_28550 | Iron-sulfur-binding reductase. | Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...] | 0.679 |
AKG44235.1 | AKG41802.1 | SXIM_28510 | SXIM_04180 | Hypothetical protein. | Pyridoxamine 5-phosphate oxidase, FMN-binding. | 0.555 |
AKG44235.1 | AKG44233.1 | SXIM_28510 | SXIM_28490 | Hypothetical protein. | Integral membrane protein. | 0.451 |
AKG44235.1 | AKG44234.1 | SXIM_28510 | SXIM_28500 | Hypothetical protein. | Iron-sulfur-binding reductase. | 0.547 |
AKG44235.1 | AKG44236.1 | SXIM_28510 | SXIM_28520 | Hypothetical protein. | Oxidoreductase. | 0.566 |
AKG44235.1 | AKG44237.1 | SXIM_28510 | SXIM_28530 | Hypothetical protein. | Secreted protein. | 0.566 |
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