STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG44336.1Integral membrane protein. (334 aa)    
Predicted Functional Partners:
AKG44335.1
ATP-dependent helicase HrpA.
       0.780
AKG44018.1
Membrane protein.
     
 0.619
AKG44015.1
DNA-binding protein.
  
     0.610
AKG44522.1
Von Willebrand factor type A.
  
     0.510
AKG42781.1
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase.
  
     0.503
AKG44825.1
Hypothetical protein.
  
     0.475
AKG44034.1
Transcriptional regulator.
 
 
   0.438
AKG44430.1
NAD-dependent aldehyde dehydrogenase.
  
     0.411
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.