Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKG44413.1 | AKG44414.1 | SXIM_30290 | SXIM_30300 | Hypothetical protein. | Subtilisin BPN. | 0.813 |
AKG44413.1 | AKG45890.1 | SXIM_30290 | SXIM_45060 | Hypothetical protein. | Sensor histidine kinase/response regulator. | 0.417 |
AKG44413.1 | AKG46375.1 | SXIM_30290 | SXIM_49910 | Hypothetical protein. | Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family. | 0.402 |
AKG44413.1 | AKG46381.1 | SXIM_30290 | SXIM_49970 | Hypothetical protein. | Glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.511 |
AKG44414.1 | AKG44413.1 | SXIM_30300 | SXIM_30290 | Subtilisin BPN. | Hypothetical protein. | 0.813 |
AKG45890.1 | AKG44413.1 | SXIM_45060 | SXIM_30290 | Sensor histidine kinase/response regulator. | Hypothetical protein. | 0.417 |
AKG45890.1 | AKG46375.1 | SXIM_45060 | SXIM_49910 | Sensor histidine kinase/response regulator. | Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family. | 0.433 |
AKG46375.1 | AKG44413.1 | SXIM_49910 | SXIM_30290 | Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family. | Hypothetical protein. | 0.402 |
AKG46375.1 | AKG45890.1 | SXIM_49910 | SXIM_45060 | Peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family. | Sensor histidine kinase/response regulator. | 0.433 |
AKG46381.1 | AKG44413.1 | SXIM_49970 | SXIM_30290 | Glycoside hydrolase family 5; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein. | 0.511 |