Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AKG41685.1 | AKG43405.1 | SXIM_03010 | SXIM_20210 | Phosphoenolpyruvate-dependent sugar phosphotransferase. | PTS system, fructose subfamily, IIC subunit. | 0.941 |
AKG41685.1 | AKG44559.1 | SXIM_03010 | SXIM_31750 | Phosphoenolpyruvate-dependent sugar phosphotransferase. | RpiR family transcriptional regulator. | 0.434 |
AKG41685.1 | murQ | SXIM_03010 | SXIM_31740 | Phosphoenolpyruvate-dependent sugar phosphotransferase. | N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.927 |
AKG43405.1 | AKG41685.1 | SXIM_20210 | SXIM_03010 | PTS system, fructose subfamily, IIC subunit. | Phosphoenolpyruvate-dependent sugar phosphotransferase. | 0.941 |
AKG43405.1 | AKG44559.1 | SXIM_20210 | SXIM_31750 | PTS system, fructose subfamily, IIC subunit. | RpiR family transcriptional regulator. | 0.514 |
AKG43405.1 | AKG45890.1 | SXIM_20210 | SXIM_45060 | PTS system, fructose subfamily, IIC subunit. | Sensor histidine kinase/response regulator. | 0.733 |
AKG44559.1 | AKG41685.1 | SXIM_31750 | SXIM_03010 | RpiR family transcriptional regulator. | Phosphoenolpyruvate-dependent sugar phosphotransferase. | 0.434 |
AKG44559.1 | AKG43405.1 | SXIM_31750 | SXIM_20210 | RpiR family transcriptional regulator. | PTS system, fructose subfamily, IIC subunit. | 0.514 |
AKG44559.1 | AKG44560.1 | SXIM_31750 | SXIM_31760 | RpiR family transcriptional regulator. | Hypothetical protein. | 0.788 |
AKG44559.1 | AKG44561.1 | SXIM_31750 | SXIM_31770 | RpiR family transcriptional regulator. | Hypothetical protein. | 0.788 |
AKG44559.1 | AKG44665.1 | SXIM_31750 | SXIM_32810 | RpiR family transcriptional regulator. | UPF0309 protein. | 0.450 |
AKG44559.1 | AKG45371.1 | SXIM_31750 | SXIM_39870 | RpiR family transcriptional regulator. | Sugar hydrolase. | 0.427 |
AKG44559.1 | AKG45890.1 | SXIM_31750 | SXIM_45060 | RpiR family transcriptional regulator. | Sensor histidine kinase/response regulator. | 0.485 |
AKG44559.1 | AKG46540.1 | SXIM_31750 | SXIM_51560 | RpiR family transcriptional regulator. | N-acetylglucosamine kinase euakryotic type. | 0.573 |
AKG44559.1 | anmK | SXIM_31750 | SXIM_50560 | RpiR family transcriptional regulator. | anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family. | 0.636 |
AKG44559.1 | murQ | SXIM_31750 | SXIM_31740 | RpiR family transcriptional regulator. | N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.961 |
AKG44560.1 | AKG44559.1 | SXIM_31760 | SXIM_31750 | Hypothetical protein. | RpiR family transcriptional regulator. | 0.788 |
AKG44560.1 | AKG44561.1 | SXIM_31760 | SXIM_31770 | Hypothetical protein. | Hypothetical protein. | 0.871 |
AKG44560.1 | murQ | SXIM_31760 | SXIM_31740 | Hypothetical protein. | N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate. | 0.745 |
AKG44561.1 | AKG44559.1 | SXIM_31770 | SXIM_31750 | Hypothetical protein. | RpiR family transcriptional regulator. | 0.788 |
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