STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG44683.1Serine/threonine protein kinase. (765 aa)    
Predicted Functional Partners:
AKG44093.1
Protein phosphatase.
 
 
 0.842
AKG46252.1
Regulatory protein.
 
   0.813
AKG42850.1
Phosphotransferase enzyme family protein.
  
     0.754
AKG43001.1
Magnesium or manganese-dependent protein phosphatase.
 
   0.685
AKG41679.1
Signal peptide protein.
  
 
 
 0.663
AKG42435.1
Serine/threonine protein kinase.
 
 
0.574
AKG44090.1
Serine/threonine protein kinase.
 
 
0.572
AKG44136.1
Serine/threonine protein kinase with PASTA sensor(s).
 
 
0.569
AKG44684.1
Lipolytic enzyme, G-D-S-L.
       0.557
AKG44682.1
TetR family transcriptional regulator.
       0.548
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
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