STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG44814.1LuxR family transcriptional regulator. (213 aa)    
Predicted Functional Partners:
AKG44813.1
Two component sensor kinase MppV.
 
 
 0.866
AKG43710.1
Histidine kinase.
 
 
 0.813
AKG42113.1
Two-component system sensor kinase.
 
 0.811
AKG42679.1
Histidine kinase.
 
 
 0.810
AKG42478.1
Integral membrane sensor signal transduction histidine kinase.
 
 0.806
AKG44457.1
Two component transcriptional regulator.
 
 
 0.801
AKG43673.1
Two-component system sensor kinase.
 
 0.799
AKG44758.1
Integral membrane sensor signal transduction histidine kinase.
 
 0.799
AKG45532.1
Sensor histidine kinase.
 
 
 0.799
AKG41476.1
Integral membrane sensor signal transduction histidine kinase.
 
 
 0.785
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
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