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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG45723.1Proline dehydrogenase. (305 aa)    
Predicted Functional Partners:
AKG45724.1
1-pyrroline-5-carboxylate dehydrogenase.
 0.994
proC
Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.
   
 0.958
AKG46147.1
Proline racemase; Belongs to the proline racemase family.
    
 0.910
AKG44636.1
Na+/solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
  
 0.881
AKG45722.1
Transcriptional regulator.
     
 0.768
AKG43791.1
Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
   
    0.617
AKG45366.1
Carbon starvation protein.
   
  
 0.613
AKG44885.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.602
AKG41899.1
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.574
AKG41839.1
Phenylacetaldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.557
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
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