STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKG46796.1Dehydrogenase/reductase. (212 aa)    
Predicted Functional Partners:
AKG42116.1
Short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
 0.684
AKG41423.1
Short-chain dehydrogenase/reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
 0.682
AKG44972.1
Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.679
AKG46535.1
Long-chain-fatty-acid--CoA ligase.
  
 
 0.675
AKG44471.1
Short-chain dehydrogenase/reductase SDR.
  
     0.663
AKG45084.1
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
 0.596
AKG44818.1
Oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 
 0.562
AKG43043.1
AMP-binding enzyme.
  
 
 0.559
AKG46592.1
Aminotransferase.
  
 
 0.523
AKG43032.1
Oxidoreductase, short chain dehydrogenase/reductase family protein.
  
     0.522
Your Current Organism:
Streptomyces xiamenensis
NCBI taxonomy Id: 408015
Other names: CGMCC 4.3534, DSM 41903, JCM 16123, MCCC 1A01550, S. xiamenensis, Streptomyces sp. 1A01550, Streptomyces sp. USC025, Streptomyces sp. USC026, Streptomyces sp. VJPR-24, Streptomyces xiamenensis Xu et al. 2009
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