STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDZ92185.1Protein of unknown function. (310 aa)    
Predicted Functional Partners:
SDZ92163.1
Thioredoxin reductase (NADPH).
       0.776
SEA57454.1
TonB-dependent Receptor Plug Domain.
 
     0.695
SEA03252.1
Hypothetical protein.
  
     0.654
SEA71102.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.634
SDZ92154.1
Dihydroneopterin aldolase.
       0.603
SEA71074.1
Type IX secretion system membrane protein, PorP/SprF family.
  
     0.580
SEA71092.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.565
SEA74954.1
Probable protein-translocating porin PorT (TC 1.B.44.1.1).
  
     0.558
SEA55449.1
Hypothetical protein.
  
     0.550
SEA70282.1
Gliding motility-associated C-terminal domain-containing protein.
  
     0.541
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.