Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDZ93455.1 | SEA05660.1 | SAMN05660909_00225 | SAMN05660909_00646 | ATP-GRASP peptide maturase, grasp-with-spasm system. | PA domain-containing protein. | 0.426 |
SEA02678.1 | SEA05660.1 | SAMN05660909_00481 | SAMN05660909_00646 | Peptidase family M28. | PA domain-containing protein. | 0.579 |
SEA02678.1 | SEA27852.1 | SAMN05660909_00481 | SAMN05660909_01329 | Peptidase family M28. | Aminopeptidase N. | 0.713 |
SEA02678.1 | SEA89283.1 | SAMN05660909_00481 | SAMN05660909_03977 | Peptidase family M28. | Ferritin; Iron-storage protein. | 0.427 |
SEA02678.1 | SEA97310.1 | SAMN05660909_00481 | SAMN05660909_04447 | Peptidase family M28. | Imidazolonepropionase. | 0.481 |
SEA05597.1 | SEA05660.1 | SAMN05660909_00645 | SAMN05660909_00646 | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | PA domain-containing protein. | 0.489 |
SEA05597.1 | SEA05709.1 | SAMN05660909_00645 | SAMN05660909_00647 | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | Hypothetical protein. | 0.448 |
SEA05660.1 | SDZ93455.1 | SAMN05660909_00646 | SAMN05660909_00225 | PA domain-containing protein. | ATP-GRASP peptide maturase, grasp-with-spasm system. | 0.426 |
SEA05660.1 | SEA02678.1 | SAMN05660909_00646 | SAMN05660909_00481 | PA domain-containing protein. | Peptidase family M28. | 0.579 |
SEA05660.1 | SEA05597.1 | SAMN05660909_00646 | SAMN05660909_00645 | PA domain-containing protein. | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | 0.489 |
SEA05660.1 | SEA05709.1 | SAMN05660909_00646 | SAMN05660909_00647 | PA domain-containing protein. | Hypothetical protein. | 0.737 |
SEA05660.1 | SEA27852.1 | SAMN05660909_00646 | SAMN05660909_01329 | PA domain-containing protein. | Aminopeptidase N. | 0.473 |
SEA05660.1 | SEA82365.1 | SAMN05660909_00646 | SAMN05660909_03621 | PA domain-containing protein. | Ketosteroid isomerase homolog. | 0.522 |
SEA05660.1 | SEA83026.1 | SAMN05660909_00646 | SAMN05660909_03673 | PA domain-containing protein. | Peptidase S46; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.421 |
SEA05660.1 | SEA89283.1 | SAMN05660909_00646 | SAMN05660909_03977 | PA domain-containing protein. | Ferritin; Iron-storage protein. | 0.427 |
SEA05660.1 | SEA97303.1 | SAMN05660909_00646 | SAMN05660909_04446 | PA domain-containing protein. | Imidazolonepropionase. | 0.536 |
SEA05660.1 | SEA97310.1 | SAMN05660909_00646 | SAMN05660909_04447 | PA domain-containing protein. | Imidazolonepropionase. | 0.514 |
SEA05709.1 | SEA05597.1 | SAMN05660909_00647 | SAMN05660909_00645 | Hypothetical protein. | N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA. | 0.448 |
SEA05709.1 | SEA05660.1 | SAMN05660909_00647 | SAMN05660909_00646 | Hypothetical protein. | PA domain-containing protein. | 0.737 |
SEA27852.1 | SEA02678.1 | SAMN05660909_01329 | SAMN05660909_00481 | Aminopeptidase N. | Peptidase family M28. | 0.713 |
page 1 of 2