STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA16156.1ADP-ribose pyrophosphatase YjhB, NUDIX family. (234 aa)    
Predicted Functional Partners:
nadE
NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.714
SEA47813.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
    
  0.700
SEB11057.1
HTH-type transcriptional regulator, transcriptional repressor of NAD biosynthesis genes.
    
 0.693
SEA67205.1
PAS domain S-box-containing protein.
  
 
  0.684
SEA05113.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
 0.623
SEA16132.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/beta-phosphoglucomutase family hydrolase.
       0.585
SEB04344.1
Nicotinamide phosphoribosyltransferase; Belongs to the NAPRTase family.
 
  
 0.459
SEB04351.1
Bifunctional NMN adenylyltransferase/nudix hydrolase.
 
  
 0.446
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.420
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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