STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA42283.1Phospholipase/carboxylesterase. (208 aa)    
Predicted Functional Partners:
SEA42295.1
Glyoxalase family protein.
    0.994
SEA42235.1
Hypothetical protein.
  
    0.805
SEA42247.1
Uncharacterized Fe-S cluster protein YjdI.
       0.803
icmF
methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.
  
 
 0.785
SEA42315.1
Polyisoprenoid-binding protein YceI; Belongs to the UPF0312 family.
       0.785
SEA42265.1
Putative redox protein.
       0.774
SEA05113.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.757
SEA81670.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.609
SEA94362.1
NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family.
 
 
 0.602
SEA42203.1
Hypothetical protein.
       0.534
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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