STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA53054.1Uncharacterized iron-regulated membrane protein. (414 aa)    
Predicted Functional Partners:
SEA80460.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.736
SEA98485.1
Iron complex outermembrane recepter protein.
 
  
 0.658
SEA67619.1
Iron complex outermembrane recepter protein.
 
  
 0.606
SEA98357.1
Iron complex outermembrane recepter protein.
 
  
 0.587
SEA53069.1
Hypothetical protein.
       0.504
SEA86448.1
Arsenical resistance protein ArsH.
  
  
  0.449
SEA59626.1
Protein of unknown function.
 
    0.433
SEA95926.1
Hypothetical protein.
 
  
  0.423
SEB10161.1
Oxidoreductase molybdopterin binding domain-containing protein.
  
  
  0.421
SDZ96734.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
  0.402
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.