STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA60124.1Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine. (200 aa)    
Predicted Functional Partners:
SEA69966.1
6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase.
  
 
 0.844
SEA44480.1
7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.
  
  
 0.718
SEA60204.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
 
     0.609
SEA60149.1
Helix-hairpin-helix motif-containing protein.
       0.526
SEA60165.1
Protein of unknown function.
       0.526
SEA60184.1
Hypothetical protein.
       0.526
SEB00685.1
Amidophosphoribosyltransferase.
  
 
 0.526
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
     
 0.462
folE
GTP cyclohydrolase I.
 
  
 0.449
SEA13801.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
     
 0.418
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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