STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA66162.1phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein. (338 aa)    
Predicted Functional Partners:
SEA66176.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
 0.998
SEA66196.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.998
SEA06103.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
 0.977
SEA06120.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
  
 0.969
SEB12410.1
Hypothetical protein.
  
  0.930
SEA20804.1
Chemotaxis protein MotB.
   
   0.842
SEA58511.1
Uncharacterized membrane protein YphA, DoxX/SURF4 family.
  
     0.587
SEA53453.1
Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
   
   0.510
SEA66211.1
Iron complex outermembrane recepter protein.
 
     0.510
SEA89301.1
Hypothetical protein.
  
     0.502
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.