STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA70096.1Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (438 aa)    
Predicted Functional Partners:
SEA07812.1
Signal transduction histidine kinase.
 
0.990
SDZ93198.1
PAS domain S-box-containing protein.
 
0.978
SEB04516.1
PAS domain S-box-containing protein.
 
0.978
SEA13955.1
PAS fold-containing protein.
 
0.976
SEA96144.1
His Kinase A (phospho-acceptor) domain-containing protein.
 
0.976
SEA67205.1
PAS domain S-box-containing protein.
 
0.975
SEA24505.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
 
 0.970
SEB10636.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
 0.956
SDZ97560.1
cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases.
 
 0.955
SDZ93267.1
HAMP domain-containing protein.
 
  
 0.953
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.