STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA76524.1Hypothetical protein. (71 aa)    
Predicted Functional Partners:
SEA04514.1
Tetratricopeptide repeat-containing protein.
  
     0.774
SEA20375.1
Protein of unknown function.
  
     0.773
SEA91577.1
Hypothetical protein.
  
     0.773
SEB01747.1
Hypothetical protein.
  
     0.773
SEA53069.1
Hypothetical protein.
  
     0.771
SEA55384.1
Hypothetical protein.
  
     0.771
SEA80069.1
Putative porin.
  
     0.771
SEA74395.1
Hypothetical protein.
  
     0.770
SEA04879.1
Tetratricopeptide repeat-containing protein.
  
     0.769
SEA62115.1
YcxB-like protein.
  
     0.767
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.