STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA90210.1Hypothetical protein. (120 aa)    
Predicted Functional Partners:
SEA90223.1
ThiF family protein.
 
     0.952
SEA90249.1
Multiubiquitin.
 
     0.952
SEA90233.1
Hypothetical protein.
 
     0.949
SEA90281.1
Zn-dependent peptidase ImmA, M78 family.
 
     0.668
SEB03962.1
Protein of unknown function.
  
     0.628
SEA90261.1
DNA-directed RNA polymerase specialized sigma subunit, sigma24 family.
       0.534
SEA90270.1
Hypothetical protein.
       0.534
SEA83704.1
Starch-binding associating with outer membrane.
  
     0.502
SEA95772.1
Mannose-6-phosphate isomerase, cupin superfamily.
  
     0.473
SEB05299.1
ABC-type molybdate transport system, substrate-binding protein.
  
     0.440
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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