STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA93922.1L-lactate dehydrogenase complex protein LldG. (211 aa)    
Predicted Functional Partners:
SEB04977.1
L-lactate dehydrogenase complex protein LldF.
 
 
 0.954
SEA37309.1
L-lactate dehydrogenase complex protein LldF.
 
 
 0.950
SEA43414.1
L-lactate dehydrogenase complex protein LldE.
 
 
 0.912
SEA37329.1
L-lactate dehydrogenase complex protein LldE.
 
 
 0.903
ftsH
Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
       0.812
SEA24134.1
D-lactate dehydrogenase.
 
 
 0.774
SEA36748.1
FAD/FMN-containing dehydrogenase.
 
 
 0.749
rsfS
Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.
       0.630
SEA13232.1
Cysteine-rich domain-containing protein.
  
 
 0.611
SEA13355.1
4Fe-4S dicluster domain-containing protein.
  
 
 0.611
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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