STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEA95926.1Hypothetical protein. (504 aa)    
Predicted Functional Partners:
SEA98538.1
Quinoprotein glucose dehydrogenase.
  
 0.819
SEA81670.1
Glutamate synthase (NADPH/NADH) large chain.
    
  0.774
SEA95933.1
Peroxiredoxin.
 
    0.717
SEA22995.1
Lysophospholipase L1.
  
     0.698
SEA47813.1
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
  
 
  0.677
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.659
SEA95946.1
Transcriptional regulator, AraC family.
 
     0.656
SEA53183.1
WD40-like Beta Propeller Repeat.
 
 
   0.654
SDZ96734.1
Ferredoxin-nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.653
SEA22929.1
TonB-linked outer membrane protein, SusC/RagA family.
  
    0.638
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.