STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEB06411.1Hypothetical protein. (205 aa)    
Predicted Functional Partners:
SEB08921.1
Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family.
   
 0.563
dnaK
Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
 
 
 
 0.536
mnmG
tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.
   
   0.532
SEA03643.1
ATPase family associated with various cellular activities (AAA).
   
 0.531
SEA45676.1
ATPase family associated with various cellular activities (AAA).
   
 0.531
SEA60204.1
AAA+-type ATPase, SpoVK/Ycf46/Vps4 family.
   
 0.531
SEB02302.1
Tetratricopeptide repeat-containing protein.
 
 
 0.531
SEB06405.1
Acetyltransferase (GNAT) family protein.
       0.497
SEB04516.1
PAS domain S-box-containing protein.
   
 0.496
SEA07711.1
Hypothetical protein.
   
 0.488
Your Current Organism:
Chitinophaga terrae
NCBI taxonomy Id: 408074
Other names: C. terrae Kim and Jung 2007, CIP 109744, Chitinophaga sp. KP01, Chitinophaga terrae Kim and Jung 2007, DSM 23920, KCTC 12836, LMG 24015, LMG:24015, strain KP01
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.