STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7EB76Reverse transcriptase Ty1/copia-type domain-containing protein. (337 aa)    
Predicted Functional Partners:
A0A3Q7JUB0
Uncharacterized protein.
  
     0.481
A0A3Q7J8K4
Uncharacterized protein.
  
     0.480
A0A3Q7IY94
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.458
A0A3Q7JC68
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.448
A0A3Q7HMW1
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.414
A0A3Q7J7G0
Uncharacterized protein.
  
     0.414
A0A3Q7G8R1
Gag_pre-integrs domain-containing protein.
  
     0.413
A0A3Q7G108
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.409
A0A3Q7GQN1
Uncharacterized protein.
  
     0.405
A0A3Q7GSK8
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.405
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.