STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7ECY5SHSP domain-containing protein; Belongs to the small heat shock protein (HSP20) family. (152 aa)    
Predicted Functional Partners:
A0A3Q7J882
Uncharacterized protein; Belongs to the actin family.
    
 
 0.594
A0A3Q7JN10
Uncharacterized protein.
    
 
 0.558
RBR1
Uncharacterized protein.
    
 
 0.527
A0A3Q7I2Y0
Homeobox domain-containing protein.
  
 
 
 0.520
K4CD61_SOLLC
Uncharacterized protein.
  
  
  0.519
A0A3Q7E9U9
Lipoxygenase domain-containing protein.
  
 
   0.517
A0A3Q7IHJ1
RRM domain-containing protein.
  
 
   0.517
A0A3Q7FKF7
Uncharacterized protein.
  
     0.516
A0A3Q7G597
Uncharacterized protein.
  
     0.513
A0A3Q7I1T1
Homeobox domain-containing protein.
  
     0.513
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.