STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7ED92Uncharacterized protein. (100 aa)    
Predicted Functional Partners:
A0A3Q7JJT8
Uncharacterized protein.
    
 0.744
A0A3Q7HRF6
RING-type domain-containing protein.
   
 0.720
A0A3Q7JS26
RING-type domain-containing protein.
   
 0.720
A0A3Q7E7V3
Uncharacterized protein.
    
 0.645
Q9XG52_SOLLC
Extensin-like protein.
    
 0.645
SGT1-1
Uncharacterized protein.
   
 
 0.590
A0A3Q7GQN5
Uncharacterized protein.
   
 
 0.590
A0A3Q7EM39
Uncharacterized protein.
    
 0.576
A0A3Q7EM41
ANK_REP_REGION domain-containing protein.
    
 0.576
A0A3Q7EMM9
Uncharacterized protein.
    
 
 0.570
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.