STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7EEK7ANK_REP_REGION domain-containing protein. (701 aa)    
Predicted Functional Partners:
A0A3Q7EXJ4
Uncharacterized protein.
 
     0.872
A0A3Q7I5X4
FLZ-type domain-containing protein.
  
     0.498
A0A3Q7I3P7
START domain-containing protein.
  
     0.446
A0A3Q7G041
Uncharacterized protein.
  
     0.444
A0A3Q7FR12
Uncharacterized protein.
  
     0.434
A0A3Q7FEN1
Uncharacterized protein.
  
     0.430
A0A3Q7I017
C2H2-type domain-containing protein.
  
     0.419
A0A3Q7GZZ9
VQ domain-containing protein.
  
     0.417
SlJAF13
BHLH domain-containing protein.
  
   
 0.411
K4BI19_SOLLC
Uncharacterized protein.
  
     0.408
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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