STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7EF24Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism. (174 aa)    
Predicted Functional Partners:
A0A3Q7GY31
RING-type E3 ubiquitin transferase.
  
 
  0.534
A0A3Q7FZZ4
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.515
A0A3Q7HEJ2
LEA_2 domain-containing protein.
  
     0.484
A0A3Q7IPZ9
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.458
K4AWA2_SOLLC
GRAS domain-containing protein; Belongs to the GRAS family.
  
   0.455
K4DHU3_SOLLC
GRAS domain-containing protein; Belongs to the GRAS family.
  
   0.438
A0A3Q7E8H1
Ipi1_N domain-containing protein.
    
 0.430
A0A3Q7FD83
LEA_2 domain-containing protein.
  
     0.430
A0A3Q7I4H1
GRAS domain-containing protein; Belongs to the GRAS family.
  
     0.428
G9HPX2_SOLLC
Auxin-responsive protein; Aux/IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations.
   
  
 0.424
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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