STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7EFE3Uncharacterized protein. (156 aa)    
Predicted Functional Partners:
A0A3Q7HN49
Uncharacterized protein.
      
 0.713
SlVPE4
Uncharacterized protein.
      
 0.713
SlVPE1
Uncharacterized protein.
      
 0.629
SlVPE5
Uncharacterized protein.
      
 0.629
SlVPE3
Uncharacterized protein.
      
 0.626
A0A3Q7HN40
Uncharacterized protein.
      
 0.571
A0A3Q7HQK9
Uncharacterized protein.
      
 0.571
A0A3Q7IJQ2
Uncharacterized protein.
      
 0.571
K4CLD8_SOLLC
Uncharacterized protein.
      
 0.571
K4CLE8_SOLLC
Uncharacterized protein.
      
 0.571
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.