STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7EFV1Uncharacterized protein. (438 aa)    
Predicted Functional Partners:
A0A3Q7ECF9
Uncharacterized protein.
  
     0.482
A0A3Q7JBC4
Uncharacterized protein.
  
     0.466
A0A3Q7FKR5
Uncharacterized protein.
  
     0.463
A0A3Q7I6C2
Uncharacterized protein.
  
     0.456
A0A3Q7GJC1
Uncharacterized protein.
  
     0.455
A0A3Q7FJT0
Uncharacterized protein.
  
     0.451
A0A3Q7GEW2
Uncharacterized protein.
  
     0.447
A0A3Q7HAS0
Uncharacterized protein.
  
     0.447
A0A3Q7GUU5
Retrotran_gag_3 domain-containing protein.
  
     0.446
A0A3Q7I4I1
Uncharacterized protein.
  
     0.445
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.