STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7EKB8Uncharacterized protein. (519 aa)    
Predicted Functional Partners:
A0A3Q7EW51
Uncharacterized protein.
  
 
  0.548
A0A3Q7JN10
Uncharacterized protein.
    
 0.548
K4AUM7_SOLLC
NB-ARC domain-containing protein.
  
    0.532
A0A3Q7H617
SET domain-containing protein.
  
  0.528
A0A3Q7IAP9
Uncharacterized protein.
  
 
   0.528
A0A3Q7H4B1
Uncharacterized protein.
  
     0.527
A0A3Q7F7N7
Uncharacterized protein.
  
     0.523
A0A3Q7FA79
Uncharacterized protein.
  
 
  0.521
A0A3Q7EIT8
Uncharacterized protein.
  
     0.517
A0A3Q7F3A3
Uncharacterized protein.
  
 
  0.504
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.