STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7ELF6Uncharacterized protein. (250 aa)    
Predicted Functional Partners:
A0A3Q7EZB3
Nuclear cap-binding protein subunit 2.
    
 0.909
A0A3Q7J5A0
MIF4G domain-containing protein.
   
 0.862
A0A3Q7ER32
RRM domain-containing protein.
   
 0.848
A0A3Q7H017
RRM domain-containing protein.
   
 0.848
A0A3Q7EXZ1
Uncharacterized protein.
    
 0.821
A0A3Q7F3L4
Uncharacterized protein.
    
 0.821
A0A3Q7H0Z8
Importin N-terminal domain-containing protein.
   
 
 0.821
A0A3Q7G987
Uncharacterized protein.
   
 
 0.814
A0A3Q7E9K8
Protein CLP1 homolog; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation; Belongs to the Clp1 family. Clp1 subfamily.
    
 0.811
A0A3Q7I6X8
Small nuclear ribonucleoprotein Sm D2.
   
 0.808
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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