STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7EM05DUF667 domain-containing protein. (190 aa)    
Predicted Functional Partners:
A0A3Q7EM39
Uncharacterized protein.
    
 
 0.776
A0A3Q7EM41
ANK_REP_REGION domain-containing protein.
    
 
 0.776
A0A494G8L6
Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
   0.752
A0A3Q7EN57
Mitochondrial Rho GTPase.
   
 
 0.750
A0A3Q7I400
Uncharacterized protein.
   
 
 0.750
A0A3Q7J9S0
Nucleoside diphosphate kinase.
    
 
 0.720
A0A3Q7JV46
Uncharacterized protein.
  
 
 
 0.705
A0A3Q7FR94
Nucleoside diphosphate kinase.
    
 
 0.611
A0A3Q7GYF2
Nucleoside diphosphate kinase.
    
 
 0.611
A0A3Q7EZL5
Tubulin_C domain-containing protein.
    
   0.606
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.