STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7EM37Uncharacterized protein. (636 aa)    
Predicted Functional Partners:
A0A3Q7H235
Uncharacterized protein.
   
 0.996
A0A3Q7HIN8
WD_REPEATS_REGION domain-containing protein.
    
 0.996
A0A3Q7I563
WD_REPEATS_REGION domain-containing protein.
    
 0.996
A0A3Q7GJC5
Uncharacterized protein.
   
 0.993
A0A3Q7ESM0
Uncharacterized protein.
    
 0.992
A0A3Q7J0N8
Uncharacterized protein.
    
 0.992
A0A3Q7J201
RRM domain-containing protein.
    
 0.969
A0A3Q7FXN3
Uncharacterized protein.
    
 0.958
A0A3Q7IN09
RRM domain-containing protein.
    
 0.958
A0A3Q7GI27
Uncharacterized protein.
   
 0.940
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.