STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7ER99Uncharacterized protein. (224 aa)    
Predicted Functional Partners:
A0A3Q7H9Y0
Uncharacterized protein.
  
     0.508
A0A3Q7JXB6
Uncharacterized protein.
  
     0.504
A0A3Q7I9Y3
Ubiquitinyl hydrolase 1.
  
     0.503
A0A3Q7GND2
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
  
     0.489
A0A3Q7H2H1
Uncharacterized protein.
  
     0.484
A0A3Q7GG46
Uncharacterized protein.
  
     0.473
A0A3Q7IU43
Dimer_Tnp_hAT domain-containing protein.
  
     0.467
A0A3Q7J278
Uncharacterized protein.
  
     0.467
A0A3Q7GXJ4
Uncharacterized protein.
  
     0.462
A0A3Q7HWL6
Uncharacterized protein.
  
     0.462
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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