STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7ESN5Uncharacterized protein. (405 aa)    
Predicted Functional Partners:
A0A3Q7H2D3
Uncharacterized protein.
   
  
 0.884
A0A3Q7FFH0
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.640
Csn5
MPN domain-containing protein.
   
 
 0.546
HMG2-2
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.530
HMGR
3-hydroxy-3-methylglutaryl coenzyme A reductase.
      
 0.521
A0A3Q7HRF6
RING-type domain-containing protein.
    
 0.434
A0A3Q7JS26
RING-type domain-containing protein.
    
 0.434
A0A3Q7HYJ1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
  0.406
A0A3Q7E9U3
MPN domain-containing protein.
   
 
  0.403
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.