STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7ET18Uncharacterized protein. (229 aa)    
Predicted Functional Partners:
A0A3Q7FDR2
GHMP_kinases_N domain-containing protein.
     
  0.800
A0A3Q7I1S8
Uncharacterized protein.
     
  0.800
K4BP00_SOLLC
Aldo_ket_red domain-containing protein.
     
  0.800
PS-2
Uncharacterized protein.
  
  
 
0.671
A0A3Q7JS77
Uncharacterized protein.
  
  
 
0.671
PGcat
Uncharacterized protein.
  
  
 
0.669
K4AYB8_SOLLC
Uncharacterized protein.
  
  
 
0.669
PG2
Polygalacturonase-2; Catalytic subunit of the polygalacturonase isozyme 1 and 2 (PG1 and PG2). Acts in concert with the pectinesterase, in the ripening process. Is involved in cell wall metabolism, specifically in polyuronide degradation. The depolymerization and solubilization of cell wall polyuronides mediated by PG2 during ripening seems to be limited by the beta subunit GP1, probably by recruiting PG2 to form PG1.
  
  
 
0.668
A0A3Q7J6V2
Uncharacterized protein.
  
  
 
0.667
A0A3Q7J5M0
Uncharacterized protein.
  
  
 
0.666
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.