STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ERN1Uncharacterized protein. (413 aa)    
Predicted Functional Partners:
A0A3Q7HWP8
DNA primase; Belongs to the eukaryotic-type primase small subunit family.
      
 0.527
A0A3Q7IM60
V-type proton ATPase subunit; Subunit of the integral membrane V0 complex of vacuolar ATPase. Vacuolar ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells, thus providing most of the energy required for transport processes in the vacuolar system. Belongs to the V-ATPase V0D/AC39 subunit family.
      
 0.527
A0A3Q7HEM1
Uncharacterized protein.
      
 0.525
A0A3Q7J593
Uncharacterized protein.
      
 0.525
Q672Q3_SOLLC
Wound/stress protein.
      
 0.524
A0A3Q7HF92
AP2/ERF domain-containing protein.
      
 0.523
PR-P2
Pathogenesis-related protein P2.
      
 0.521
Hsc70.3
Uncharacterized protein; Belongs to the heat shock protein 70 family.
      
 0.520
PPOF_SOLLC
Polyphenol oxidase F, chloroplastic; Catalyzes the oxidation of mono- and o-diphenols to o- diquinones; Belongs to the tyrosinase family.
      
 0.454
A0A3Q7FWY8
Uncharacterized protein.
      
 0.451
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.