STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7EX03Uncharacterized protein. (156 aa)    
Predicted Functional Partners:
A0A3Q7G000
Uncharacterized protein.
  
     0.510
A0A3Q7G5E5
Uncharacterized protein.
  
     0.489
A0A3Q7JBL6
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.459
A0A3Q7G4R6
Uncharacterized protein.
  
     0.455
A0A3Q7G4F1
Uncharacterized protein.
  
     0.454
A0A3Q7IU36
Uncharacterized protein.
  
     0.453
A0A3Q7JA67
Uncharacterized protein.
  
     0.450
A0A3Q7GG48
Uncharacterized protein.
  
     0.447
A0A3Q7E7A6
Uncharacterized protein.
  
     0.446
A0A3Q7FJU2
Uncharacterized protein.
  
     0.443
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.