STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7F1B5Uncharacterized protein. (200 aa)    
Predicted Functional Partners:
A0A3Q7F6P1
VPS9 domain-containing protein.
    
 0.751
GDI1
Guanosine nucleotide diphosphate dissociation inhibitor.
    
 0.750
A0A3Q7HLY0
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.734
A0A3Q7J5Z9
Guanosine nucleotide diphosphate dissociation inhibitor; Belongs to the Rab GDI family.
    
 0.734
A0A3Q7F6B2
Rab proteins geranylgeranyltransferase component; Substrate-binding subunit of the Rab geranylgeranyltransferase (GGTase) complex. Binds unprenylated Rab proteins; Belongs to the Rab GDI family.
    
 0.679
A0A3Q7GYM6
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.675
A0A3Q7GR82
Pep3_Vps18 domain-containing protein.
    
 
 0.663
A0A3Q7IA65
Protein VACUOLELESS1; Required for vacuole biogenesis and vacuole enlargment in dividing and expanding cells. Involved in the docking or fusion of prevacuolar vesicles; Belongs to the VPS16 family.
    
 
 0.660
A0A3Q7GVL1
Vacuolar protein sorting-associated protein 11 homolog; Involved in regulating membrane fusion at the tonoplast and the prevacuolar compartment.
    
 
 0.647
A0A3Q7GS54
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
    
 
 0.645
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.