STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7F355Uncharacterized protein; Belongs to the peptidase C1 family. (500 aa)    
Predicted Functional Partners:
A0A3Q7FPD9
Uncharacterized protein.
    
  0.995
A0A3Q7FQD5
Dpoe2NT domain-containing protein.
    
   0.864
A0A3Q7G5J6
OBG-type G domain-containing protein.
    
   0.864
A0A3Q7IMJ2
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
    
   0.864
A0A3Q7FJM6
Uncharacterized protein.
    
  0.856
A0A3Q7EHA9
Citrate synthase; Belongs to the citrate synthase family.
   
   0.847
A0A3Q7F159
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.847
A0A3Q7FDE5
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.847
A0A3Q7FJA0
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
 0.847
A0A3Q7HFR4
Citrate synthase.
   
   0.847
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.