STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7F5P2Reverse transcriptase Ty1/copia-type domain-containing protein. (460 aa)    
Predicted Functional Partners:
A0A3Q7FNT1
Uncharacterized protein.
  
     0.502
A0A3Q7HB03
Uncharacterized protein.
  
     0.501
A0A3Q7IUV8
Uncharacterized protein.
  
     0.494
A0A3Q7I6L0
Uncharacterized protein.
  
     0.493
A0A3Q7I2A3
Uncharacterized protein.
  
     0.479
A0A3Q7I545
Uncharacterized protein.
  
     0.478
A0A3Q7IGQ4
Uncharacterized protein.
  
     0.477
A0A3Q7IGX4
Reverse transcriptase Ty1/copia-type domain-containing protein.
  
     0.473
A0A3Q7H7M9
Uncharacterized protein.
  
     0.471
A0A3Q7GR84
Uncharacterized protein.
  
     0.470
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.