STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7F651Katanin_con80 domain-containing protein. (737 aa)    
Predicted Functional Partners:
A0A3Q7F2D8
AAA domain-containing protein.
   
 
 0.637
A0A3Q7GZN5
Katanin p60 ATPase-containing subunit A1; Severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays.
   
 
 0.637
A0A3Q7ISW3
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.637
A0A3Q7IXN7
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.637
A0A3Q7J8Q7
AAA domain-containing protein.
   
 
 0.637
A0A3Q7JMP1
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.637
A0A3Q7JVM6
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.637
A0A3Q7F4S6
WD_REPEATS_REGION domain-containing protein.
 
   
  0.551
A0A3Q7EW96
Katanin p80 WD40 repeat-containing subunit B1 homolog; May participate in a complex which severs microtubules in an ATP-dependent manner. Microtubule severing may promote rapid reorganization of cellular microtubule arrays; Belongs to the WD repeat KATNB1 family.
     
 
0.540
A0A3Q7GHE2
AAA domain-containing protein; Belongs to the AAA ATPase family.
   
 
 0.485
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.