Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7F930Uncharacterized protein. (417 aa)    
Predicted Functional Partners:
A0A3Q7JT72
RING-type domain-containing protein.
   
  
 0.607
alpha-DOX2
Alpha-dioxygenase 2 enzyme.
      
 0.529
A0A3Q7F413
RING-type domain-containing protein.
   
  
 0.524
A0A3Q7F8D0
Uncharacterized protein.
      
 0.523
A0A3Q7FAG6
Uncharacterized protein.
      
 0.523
NRT2.2
MFS domain-containing protein.
      
 0.514
A0A3Q7J087
MFS domain-containing protein.
      
 0.514
A0A3Q7J786
HTH myb-type domain-containing protein.
  
     0.498
A0A3Q7J790
HTH myb-type domain-containing protein.
  
     0.486
A0A3Q7FW38
Uncharacterized protein.
      
 0.468
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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