STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7F973Uncharacterized protein. (154 aa)    
Predicted Functional Partners:
MLH1
DNA_mis_repair domain-containing protein.
    
 0.739
A0A3Q7IEM5
Uncharacterized protein.
  
 0.619
A0A3Q7FEW1
DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.618
MSH2
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.610
A0A3Q7ID12
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.610
pcna
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.597
A0A3Q7H950
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.593
A0A3Q7I7Y0
Uncharacterized protein.
  
 0.585
MSH1
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
 0.585
A0A494G8W3
JmjC domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
  
 0.585
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.