STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7FAY5NAC domain-containing protein. (198 aa)    
Predicted Functional Partners:
A0A3Q7FQE6
NAC domain-containing protein.
  
 
 0.564
K4BZM6_SOLLC
Uncharacterized protein.
  
     0.513
A0A3Q7J3I9
Senescence domain-containing protein.
  
     0.511
A0A3Q7HF60
NAC domain-containing protein.
  
 
 0.504
A0A3Q7IZ94
Uncharacterized protein.
  
 
  0.500
A0A3Q7GJL5
NAC domain-containing protein.
  
 
 0.499
A0A3Q7GZX4
Uncharacterized protein.
  
 
  0.498
A0A3Q7H2W3
Methyltransferase.
  
     0.498
A0A3Q7IWI3
Abhydrolase_3 domain-containing protein.
  
     0.498
A0A3Q7HL33
Remorin_C domain-containing protein.
  
     0.497
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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