STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A3Q7FD04Branched-chain-amino-acid aminotransferase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (417 aa)    
Predicted Functional Partners:
A0A3Q7GK31
Uncharacterized protein.
  
 0.985
A0A3Q7J9S1
Uncharacterized protein.
  
 0.985
K4C627_SOLLC
Isopropylmalate synthase.
  
 0.962
IPMS2
Pyruvate carboxyltransferase domain-containing protein.
  
 0.954
K4CJ56_SOLLC
Isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
  
 0.954
A0A3Q7HVQ3
3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate.
    
 0.951
Q6R8F6_SOLLC
Cystathionine gamma synthase.
   
 0.919
GSH1-2
GSH1.
    
  0.902
A0A3Q7IMS6
Threonine dehydratase.
  
 
 0.892
A0A3Q7GYE7
Uncharacterized protein.
  
 
 0.887
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum L., Solanum lycopersicum var. humboldtii, tomato
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.